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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015788162.1_cds_XP_016449859.1_417
CDS Infomation

[gene=LOC107774660] [db_xref=GeneID:107774660] [protein=vacuolar cation/proton exchanger 3-like] [protein_id=XP_016449859.1] [location=complement(join(264065..264087,265461..265557,265874..265990,266690..266743,266822..266938,267123..267257,267691..267903,268017..268213,268408..268436,268789..268856,268956..269219,270076..270120))] [gbkey=CDS]
Sequence

ATGGCTAAAGATTCGCAATTTACAGGGGCTAAGTCCCATCTTGAAATGGGATCACTTGAA
GGAAGAGCAGTACTTCAGCTTGAGGATGAGAACCTTGTGAACTCTAAGAATAATGATAGG
AGGACATCTTCTATGGATGCCACTCCTCAGATATCAGTTTTCGATGCCGATGCAGACGAA
GTTAGTTGTAAATGTATGTGGAATAATTTAGTAAGGCAGATGCAGATAGTTTTGTTCTCC
AAGAAGTTAAACATGCTTATTCCTTGTGGTCCTCTAGCCATTCTTGTTGATGAGTTAACC
GATCATCATGGATGGATCTTCTTTCTTAGCTTGTTAGGAATCATACCCCTTGCAGAGCGT
TTAGGTTGGGCGACAGAGCAACTGGCTTTCTATACGGGACCAACAGTTGGAGGACTTTTA
AATGCAACTTTTGGTAACGCAACAGAGCTAATAATATCAATGTATGCACTGAGACGTGGC
ATGATTCGTGTGGTTCAGCAGTCATTATTAGGCTCAATTCTGTCTAATACATTACTAGTG
CTTGGATGTGCATTTTTTGGTGGTGGACTTGTTCATTCCAGTAAGGACCAAGTTTTTGAC
AAAGGAAACGCTGTGATGAATTCAGGGTTGCTTTTGATGGCAGTTATGGGCCTGCTGTTT
CCCGCTGTCCTCCATTTTACACACACTGAGGTGCATTTTGGGAAGTCAGAGCTGGCACTT
TCCAGGTTTAGCAGCTGCGTAATGCTTGTAGCATATGGTGCATACCTGTTTTATCAGCTG
ACTAGTCAGAATAGTCTTTACATGCCAATTGCTGAGGAAGAGGGTGAGAATGACGGGGGC
GCAGATGAGGAAGAAGCTCCTGAGATATCAAAATGGGGGTCAATCGTATGGCTTTCGATT
TTGACACTATGGATAGCAGTCTTGTCAGAGTACCTGGTTAATGCCATAGAGGGGGCATCA
GTTGCTATGAGTATTCCTGTGTCATTTATAAGTGTCATACTGCTCCCAATCGTTGGAAAT
GCAGCTGAGCATGCTGGTGCTGTCATGTTTGCTGTCAAAGACAAGCTTGACATCTCTTTG
GGAGTGGCAATAGGCTCATCAACGCAGATTGCCATGTTTGGGATCCCATTCTGTGTTGTG
GTTGGATGGATAATGGGTCGTCCTATGGACTTGAACTTCCAATTATTTGAAACGGCCACA
CTTTTCATGAGTGTTCTTGTAGTAGCATTCATGTTGCAGGATGGAACTTCAAATTACTTT
AAAGGACTGATGCTCCTTCTCTGCTATCTGATAGTTGCTGCAAGTTTCTTTGTGCATATA
GATCCAGAGTCTATACAGGACAAGCCCAAAAAGCCATAA

Peptide Sequence

PEP ID

XP_016449859.1
PEP Infomation

PREDICTED: vacuolar cation/proton exchanger 3-like [Nicotiana tabacum]
Sequence

MAKDSQFTGAKSHLEMGSLEGRAVLQLEDENLVNSKNNDRRTSSMDATPQISVFDADADE
VSCKCMWNNLVRQMQIVLFSKKLNMLIPCGPLAILVDELTDHHGWIFFLSLLGIIPLAER
LGWATEQLAFYTGPTVGGLLNATFGNATELIISMYALRRGMIRVVQQSLLGSILSNTLLV
LGCAFFGGGLVHSSKDQVFDKGNAVMNSGLLLMAVMGLLFPAVLHFTHTEVHFGKSELAL
SRFSSCVMLVAYGAYLFYQLTSQNSLYMPIAEEEGENDGGADEEEAPEISKWGSIVWLSI
LTLWIAVLSEYLVNAIEGASVAMSIPVSFISVILLPIVGNAAEHAGAVMFAVKDKLDISL
GVAIGSSTQIAMFGIPFCVVVGWIMGRPMDLNFQLFETATLFMSVLVVAFMLQDGTSNYF
KGLMLLLCYLIVAASFFVHIDPESIQDKPKKP

Transcript Sequence

Gene sequence data has not been registered.